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J. Challacombe, A. Rechtsteiner, R. Gottardo, L.M. Rocha, E.P. Brown, T. Shenk,
M. Altherr, and T. Brettin.
Evaluation of the host transcriptional response to human
cytomegalovirus infection.
Physiological Genomics., 10.1152/physiolgenomics.00155.2003 (in
press), 2004.
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S. Deerwester, S.T. Dumais, G. W. Furnas, T. K. Landauer, and R. Harshman.
Indexing by Latent Semantic Analysis.
Journal of the American Society for Information Science,
41(6):391-407, 1990.
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A. Rechtsteiner, R. Gottardo, L.M. Rocha, and M.E. Wall.
Singular Value Decomposition for analysis of gene expression.
In R. Spang, P. Beziat, and M. Vingron, editors, Currents in
Computational Molecular Biology. Proceedings of the The Seventh Annual
International Conference on Research in Computational Molecular Biology
(RECOMB 2003), pages 275-276, Berlin, 2003.
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A. Rechtsteiner and L.M. Rocha.
MeSH key terms for validation and annotation of gene expression
clusters.
In A. Gramada and Philip E. Bourne, editors, Currents in
Computational Molecular Biology. Proceedings of the Eight Annual
International Conference on Research in Computational Molecular Biology
(RECOMB 2004), pages 212-213, 2004.
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Luis M. Rocha.
Semi-metric behavior in document networks and its application to
recommendation systems.
In Vincenzo Loia, editor, Soft Computing Agents: A New
Perspective for Dynamic Information Systems, pages 137-163. IOS Press,
2002.
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K. Verspoor, J. Cohn, C. Joslyn, S. Mniszewski, A. Rechtsteiner, L.M. Rocha,
and T. Simas.
Protein annotation as term categorization in the gene ontology using
word proximity networks.
BMC Bioinformatics, 2004 (in Press).
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M.E. Wall, A. Rechtsteiner, and L.M. Rocha.
Singular Value Decomposition and Principal Component Analysis.
In D.P. Berrar, W. Dubitzky, and M. Granzow, editors, A
Practical Approach to Microarray Data Analysis, pages 91-109, Boston, MA,
2003. Kluwer Academic Publishers.
Andreas Rechtsteiner
2004-06-28